Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6008568 chr22:46695549 A/G TXN2 chr22:36863083-36878077:- 0.57 6.79 3.38E-11 Box Plot
THCA rs6008568 chr22:46695549 A/G ZMAT5 chr22:30126945-30163000:- 0.47 6.48 2.23E-10 Box Plot
THCA rs6009027 chr22:47289785 C/T ACO2 chr22:41865129-41924993:+ -0.58 -7.32 1.06E-12 Box Plot
THCA rs6009027 chr22:47289785 C/T ADSL chr22:40742504-40786467:+ -0.67 -7.71 7.52E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T ALG12 chr22:50293877-50312106:- -0.63 -7.88 2.25E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T ANKRD54 chr22:38226862-38245334:- -0.69 -8.67 6.65E-17 Box Plot
THCA rs6009027 chr22:47289785 C/T AP1B1 chr22:29723669-29819168:- -0.81 -8.58 1.38E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T APOBEC3F chr22:39436609-39449915:+ -0.5 -6.03 3.23E-9 Box Plot
THCA rs6009027 chr22:47289785 C/T ARFGAP3 chr22:43192508-43254112:- -0.7 -7.65 1.14E-13 Box Plot
THCA rs6009027 chr22:47289785 C/T ARSA chr22:51061182-51066601:- -0.67 -6.75 4.4E-11 Box Plot
THCA rs6009027 chr22:47289785 C/T ASCC2 chr22:30184597-30234293:- -0.64 -7.47 3.92E-13 Box Plot
THCA rs6009027 chr22:47289785 C/T ATXN10 chr22:46067678-46241187:+ -0.75 -8.21 2.03E-15 Box Plot
THCA rs6009027 chr22:47289785 C/T BRD1 chr22:50166931-50221160:- -0.73 -8.43 4.23E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T C22orf13 chr22:24936406-24951903:- -0.65 -7.35 8.84E-13 Box Plot
THCA rs6009027 chr22:47289785 C/T C22orf28 chr22:32783562-32808274:- -0.51 -6.66 7.32E-11 Box Plot